cellpose

anatomical segmentation algorithm

cellpose has been downloaded 2,426,627 times in total on PyPI, including 111,548 in the last 30 days. The latest version is 4.1.1, released Mar 31, 2026. It is distributed under the BSD license.

Version4.1.1
Downloads
2.43M
LicenseBSD
AuthorMarius Pachitariu and Carsen Stringer
UpdatedMar 31, 2026

Downloads

Weekly, last 90d.
Includes CI traffic.

VersionsTotal4.*3.*
Range
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Granularity
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CI traffic
Stack: OffCI: Included3 / 101 series
Selected total624.27k
2.4MAll-time
111.5kLast 30 days
2.6kLast 24 h
0.03/sPer second

Version distribution

Share of downloads by released version. Computed over the last quarter.

  • 01

    4.2.1.1

    130.4k downloads
    40.3%
  • 02

    3.1.1.3

    40.7k downloads
    12.6%
  • 03

    4.1.1

    25.4k downloads
    7.8%
  • 04

    3.1.1

    17.6k downloads
    5.4%
  • 05

    3.1.1.1

    15.1k downloads
    4.7%
  • 06

    3.1.1.2

    12.1k downloads
    3.7%
  • 07

    4.0.5

    10.1k downloads
    3.1%
  • 08

    4.0.8

    7.1k downloads
    2.2%
  • 09

    Other

    65.4k downloads
    20.2%

Guess the next day

Thirteen recent days of cellpose downloads. Drag the green handle on the right to guess where day fourteen lands.

TRUTH2.6k2.5kSUNMONTUEWEDTHUFRISATSUNMONTUEWEDTHUFRI
    cellpose · 2.4M downloads on PyPI