singler
Python bindings to the singleR algorithm to annotate cell types from known references.
singler has been downloaded 87,916 times in total on PyPI, including 1,905 in the last 30 days. The latest version is 0.5.0, released Jan 5, 2026. It is distributed under the MIT license.
Version0.5.0
Downloads
87.92k
LicenseMIT
AuthorAaron Lun
UpdatedJan 5, 2026
Downloads
Weekly, last 90d.
Includes CI traffic.
VersionsTotal0.*
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Stack: OffCI: Included2 / 12 series
Selected total13.37k
87.9kAll-time
1.9kLast 30 days
11Last 24 h
<0.01/sPer second
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Version distribution
Share of downloads by released version. Computed over the last quarter.
- 0149.3%
0.5.0
3.3k downloadsDownloads3.3k49.3% - 0212.1%
0.4.2
809 downloadsDownloads80912.1% - 039.7%
0.4.1
650 downloadsDownloads6509.7% - 048.2%
0.4.0
548 downloadsDownloads5488.2% - 054.1%
0.3.0
271 downloadsDownloads2714.1% - 063.9%
0.1.1
262 downloadsDownloads2623.9% - 073.2%
0.0.2
213 downloadsDownloads2133.2% - 083.2%
0.1.0
212 downloadsDownloads2123.2% - 096.4%
Other
425 downloadsDownloads4256.4%
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