singler
Python bindings to the singleR algorithm to annotate cell types from known references.
singler has been downloaded 89,741 times in total on PyPI, including 2,233 in the last 30 days. The latest version is 0.5.0, released Jan 5, 2026. It is distributed under the MIT license.
Version0.5.0
Downloads
89.74k
LicenseMIT
AuthorAaron Lun
UpdatedJan 5, 2026
Downloads
Weekly, last 90d.
Includes CI traffic.
VersionsTotal0.*
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Stack: OffCI: Included2 / 12 series
Selected total14.73k
89.7kAll-time
2.2kLast 30 days
17Last 24 h
<0.01/sPer second
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Version distribution
Share of downloads by released version. Computed over the last quarter.
- 0150.4%
0.5.0
3.6k downloadsDownloads3.6k50.4% - 0211.9%
0.4.2
850 downloadsDownloads85011.9% - 0310.1%
0.4.1
716 downloadsDownloads71610.1% - 047.8%
0.4.0
558 downloadsDownloads5587.8% - 053.8%
0.3.0
269 downloadsDownloads2693.8% - 063.7%
0.1.1
267 downloadsDownloads2673.7% - 073.3%
0.1.0
232 downloadsDownloads2323.3% - 083.1%
0.0.2
218 downloadsDownloads2183.1% - 095.9%
Other
423 downloadsDownloads4235.9%
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