singler
Python bindings to the singleR algorithm to annotate cell types from known references.
singler has been downloaded 87,926 times in total on PyPI, including 1,793 in the last 30 days. The latest version is 0.5.0, released Jan 5, 2026. It is distributed under the MIT license.
Version0.5.0
Downloads
87.93k
LicenseMIT
AuthorAaron Lun
UpdatedJan 5, 2026
Downloads
Weekly, last 90d.
Includes CI traffic.
VersionsTotal0.*
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Stack: OffCI: Included2 / 12 series
Selected total13.39k
87.9kAll-time
1.8kLast 30 days
10Last 24 h
<0.01/sPer second
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Version distribution
Share of downloads by released version. Computed over the last quarter.
- 0149.3%
0.5.0
3.3k downloadsDownloads3.3k49.3% - 0212.1%
0.4.2
809 downloadsDownloads80912.1% - 039.7%
0.4.1
650 downloadsDownloads6509.7% - 048.2%
0.4.0
548 downloadsDownloads5488.2% - 054.1%
0.3.0
271 downloadsDownloads2714.1% - 063.9%
0.1.1
262 downloadsDownloads2623.9% - 073.2%
0.1.0
212 downloadsDownloads2123.2% - 083.2%
0.0.2
211 downloadsDownloads2113.2% - 096.4%
Other
425 downloadsDownloads4256.4%
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