singler
Python bindings to the singleR algorithm to annotate cell types from known references.
singler has been downloaded 86,659 times in total on PyPI, including 2,273 in the last 30 days. The latest version is 0.5.0, released Jan 5, 2026. It is distributed under the MIT license.
Version0.5.0
Downloads
86.66k
LicenseMIT
AuthorAaron Lun
UpdatedJan 5, 2026
Downloads
Weekly, last 90d.
Includes CI traffic.
VersionsTotal0.*
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Stack: OffCI: Included2 / 12 series
Selected total16.42k
86.7kAll-time
2.3kLast 30 days
52Last 24 h
<0.01/sPer second
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Version distribution
Share of downloads by released version. Computed over the last quarter.
- 0138.7%
0.5.0
3.2k downloadsDownloads3.2k38.7% - 0212.5%
0.4.2
1.0k downloadsDownloads1.0k12.5% - 0310.8%
0.4.1
890 downloadsDownloads89010.8% - 049.7%
0.4.0
794 downloadsDownloads7949.7% - 055.3%
0.3.0
434 downloadsDownloads4345.3% - 065.2%
0.1.1
425 downloadsDownloads4255.2% - 074.8%
0.1.0
397 downloadsDownloads3974.8% - 084.6%
0.0.2
380 downloadsDownloads3804.6% - 098.4%
Other
686 downloadsDownloads6868.4%
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